Browse of TCMCG016C07234 protein

CDS

Accession Number	TCMCG016C07234
gbkey	CDS
Protein Id	OMO89498.1
Location	complement(join(14572..17190,18515..18580,18845..18939,19044..19395,19732..19850,19947..20040,20300..20410,20523..20597))
Organism	Corchorus capsularis
locus_tag	CCACVL1_07787

Protein

Length	1176aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source	AWWV01008676.1
Definition	C-5 cytosine methyltransferase [Corchorus capsularis]
Locus_tag	CCACVL1_07787

EGGNOG-MAPPER Annotation

COG_category	L
Description	Pentatricopeptide repeat-containing protein
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03016        [VIEW IN KEGG]
KEGG_ko	ko:K15336        [VIEW IN KEGG]
EC	2.1.1.204        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004518        [VIEW IN EMBL-EBI] GO:0004519        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009451        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016788        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGAAAGCGAATGCACAGGGACGGAGGAGCCATGGAGAGTATTAGAATTTTACAGCGGCATTGGCGGCATGAGGTATTCGCTAATGAAAGCTGGCGTCAACGCTCAAGTAGTCGAAGCATTTGATATCAACGATAAAGCTAATGACGTTTACCAGCATAATTTCGGTCACCGTCCTTATCAGGGAAATATTCAGAGCCTAACTGACGCTGATCTCGACAGCTATTGGGCTCATGTGTGGCTTCTTTCCCCTCCTTGCCAACCCTACACTAGACAAGGTCTCCAAAAACACTCTGCTGATGCTCGGGCATTTTCATTTATTAATATTCTCGAACTTATACCACGCATGTCACAACCGCCATGTATGTTATTTGTGGAGAATGTTGTTGGATTCGAGGCAAAAAGGAAACCTTTATCTTTTCAGTGCCAACTGTTTACTAACCAGCTTCTCTGGTCTCCAAGCATATTATTTGGTAATGATGAAAATATGGAGACTGGTGGACATGACCAACCACAAGAGAACTGGGATAAGTTGATCGAGTCTTGCCAGCCAATAGAGAAGTTTCTTGAATTTACAATTTCAAGTGATCAGGTAGACATGGAGACCAATTCTTTAGTGATCACTGATGTTTCAACAAATGGTTTGGAAACTTCAAAGAAACTTGTTGAACAAGATGTATTTGATTTCAGCTCTATAGATCAGTTTGTAGTTCCATTAAGTCTAATCGAGAGGTGGGGAAGTGCTATGGATATTGTGTACCCTGATTCAAAACGTTGCTGCTGTTTTACTAAAAGCTATTATCGATATGTAAAAGGCACTGGCTCCCTCTTGGCAACAGTCCAGCCAAAGAAAAAGGGGAAAGCATCTTCCTTAAAGGAGCAGCGCCTTAGATATTTTACTCCTAGGGAGAGGCCAAACCAGCGCAAAATGAAGTTTTTATTCAAGAGTTCTTCATTATTCCAAACTTTCCTTCCTCGTTCTTTTCCAAGCCCCAAATATCTCTGCTCTCAGCCCCAAACGCCACTTCCCCTGAATCCCAATCCAAACACCAATTTTCCCGAGAAAATCACCTCAGATTCTCACTTTCCCAGTAAACCCATTTCAGATTCCGATTTCCCCGGGTACCCAACGCTGCCCAGATCCAAAGACCCCCATTTGACATCATCATTGCAACAAGATGGAAGCTTGTCTGTAACCCATGTGATAAACACTCTTCTGACCCATAAAGAGGATCCGAAATCAGCTTTGAATTACTTCAAATCTATCGAATACAGGCGGGGTTTTGTCCGAGGCGTTGATGTCTTATGTGTTCTGCTTCACATTTTGGCTGGATCTCCACAGACTTATAAACAAGTTGCATGTTTGCTTAATAGGTTTGTTTCCGGCGATTCAGGACCTGCCCCTGTTGTCTTTTTAGATCACCTGATTGATAGTGCGAAAAAGTTTGATTTTGAGTTGGATTCACGGGTTTATAATTACTTATTGAATAGTTATGTTAGAGTTGATAAGTTTGATTATGCTTTGGATTGTTTTGATGGAATGATTGAGCGTAATATAGAGGTTTCCTTACGCTTTATGAATATTCTTTTAACGGCACTAGTTAAGAGGAATTTGATTGACAAAGCTAGGGAGTTATATTATAAGATGGTTTCTATTGGAGTTACAGGTGATTCTGTTACAGTTTATCTGATGATGCGTGCATTTTTGAAAGAAGGGAATCCTTGGGAAGCAGAGAAGTTTTTCAAGGAGGCTAAGGCTAGAGGGACTGAACTTGATGCTGCAGCTTATATTATTGCTATTCAGGCTGCTTGTCAGAAACCTGATTTGGTTATGGCTGGTGAGTTATTGCGGGAAGTGAGGGACAGGGGATGGGTTCCTTCTGAGTTTACATTTACCACTGTTATTCTGGCTTTTCTGAAGGAAGGAAATTTGGTTGAGGCGTTGAGACTCAAGGATGAGATGTTGACTTGTTGGAAGCGGTTGAATATAGTGGTTGCAACTAGTTTAATGAAGGGATACTGCAAGAAAGGTGATGTTGATAGTGCTCTGGAATTGTTTGATAAGATTAAGGAGGATGGGCTTTCTCCTAATAAGGTTACCTTTGCTGTTTTGATTGAATGGTGTTGTAGGAATGGGAATGTGAAAAAAGCATATGAGCTTTATACAGAAATGAAGCTCATGCATATTCAACCTACTGTTTTTATCGTGAATTCCTTGATTCGTGGATTCTTGGAAGCTCGCTCATTGAAGGAGGCATCCAGTTTGTTTGATGAGGCGGTTGAATCTGGCATTGCCAATGTTTTCACATTTAATGTTTTCCTACACCATTTCTGTAATGATGGTAAGGTGAATGAAGCTTGCACTTTATGGCAGAGAATGGTGGCTAATGGCCTGGAACCTAGTTATGTTTCCTACAATGATATGATACTTGCTCACTGTAAAGCAGGGAATATGGATATGGCACATAATGTATTCTTAGAGATGCTTAACCAAGGCATTAAACCTACTGTCACCACATATTCCATATTAATGGATGGGCATTTCAGAAAAGGTGATGCTGAAAGGGCATTAAATTTGTTTGACGAAATGGTCAACGTAAATATTGCCCCCTCAGACTTCACATTCAACATAATCATTAATGGGTTGACCAAAGTTGGCCGTACATCTGTGGCAAAGGAGATGTTGAAGAAGTTTGTCGATAAGGGTTTTGTCCCTATGTGTATGACATACAATTCCATTATTAATGGGTTCATCAAGGAGGATTCCATTAACTCTGCCTTGGCAGCTTATAGAGAAATGTGTGAAGATGGAGTTTCTCCCAATGTTGTCACATACACCATCTTGATTGATGGGTTTTGCAAAAGCAATAATATTGATCTTGCTTTGAAAATGTATAGTGAGATGAAAAGCAGGGGTCTTCAATTGGATATTCCTGCATTCGGTGCTCTCATTAATGGTTTATGCAAGAATACAAACATGGATAGAGCATGTGAGCTTTTCTCTGAACTCCAACAAATTGGGTTATCTCCAAATATACATGTTTACAACAGCTTGATTAGAGGGTTTAGGAATGTAAATAATATGGAAGCAGCTCTTGACTTGCATAAGAAAATGATAAATGAGGGAATTCCTTTGGATCTGCAAACGTACACTTCGCTGATTGATGGATTGTTGAGAGATGGTAAATTACTCTTGGCATCTGATCTTTACTCAGAGATGCGTGCTAAGGACATTGTGCCTGATAAAATCACTTGTACTGTTCTATTAAATGGTCTTTGTAATAAAAGACAGCTTGAGAATGCTAAGAATATCTTAGAAGAGATGAACAGAAAGGGTTTGACTCCTAATTCTCTTATTTATAATACTTTGATTGCTGGACACTTTAAGGAGGGGAATTTAGAAGAGGCTTTGAGATTGCATAATGAGATGCTTGATAGAGGTCTTGTACCTGATGACACTACTTATGATATACTTGTTAATGGACATGCTAAGGGTGGAGATTTTCTATCTGGAGTTTCAAGTGCTTAA

Protein:   MAESECTGTEEPWRVLEFYSGIGGMRYSLMKAGVNAQVVEAFDINDKANDVYQHNFGHRPYQGNIQSLTDADLDSYWAHVWLLSPPCQPYTRQGLQKHSADARAFSFINILELIPRMSQPPCMLFVENVVGFEAKRKPLSFQCQLFTNQLLWSPSILFGNDENMETGGHDQPQENWDKLIESCQPIEKFLEFTISSDQVDMETNSLVITDVSTNGLETSKKLVEQDVFDFSSIDQFVVPLSLIERWGSAMDIVYPDSKRCCCFTKSYYRYVKGTGSLLATVQPKKKGKASSLKEQRLRYFTPRERPNQRKMKFLFKSSSLFQTFLPRSFPSPKYLCSQPQTPLPLNPNPNTNFPEKITSDSHFPSKPISDSDFPGYPTLPRSKDPHLTSSLQQDGSLSVTHVINTLLTHKEDPKSALNYFKSIEYRRGFVRGVDVLCVLLHILAGSPQTYKQVACLLNRFVSGDSGPAPVVFLDHLIDSAKKFDFELDSRVYNYLLNSYVRVDKFDYALDCFDGMIERNIEVSLRFMNILLTALVKRNLIDKARELYYKMVSIGVTGDSVTVYLMMRAFLKEGNPWEAEKFFKEAKARGTELDAAAYIIAIQAACQKPDLVMAGELLREVRDRGWVPSEFTFTTVILAFLKEGNLVEALRLKDEMLTCWKRLNIVVATSLMKGYCKKGDVDSALELFDKIKEDGLSPNKVTFAVLIEWCCRNGNVKKAYELYTEMKLMHIQPTVFIVNSLIRGFLEARSLKEASSLFDEAVESGIANVFTFNVFLHHFCNDGKVNEACTLWQRMVANGLEPSYVSYNDMILAHCKAGNMDMAHNVFLEMLNQGIKPTVTTYSILMDGHFRKGDAERALNLFDEMVNVNIAPSDFTFNIIINGLTKVGRTSVAKEMLKKFVDKGFVPMCMTYNSIINGFIKEDSINSALAAYREMCEDGVSPNVVTYTILIDGFCKSNNIDLALKMYSEMKSRGLQLDIPAFGALINGLCKNTNMDRACELFSELQQIGLSPNIHVYNSLIRGFRNVNNMEAALDLHKKMINEGIPLDLQTYTSLIDGLLRDGKLLLASDLYSEMRAKDIVPDKITCTVLLNGLCNKRQLENAKNILEEMNRKGLTPNSLIYNTLIAGHFKEGNLEEALRLHNEMLDRGLVPDDTTYDILVNGHAKGGDFLSGVSSA